class Bio::FlatFileIndex::NameSpaces
namespaces
Internal use only.
Public Class Methods
Source
# File lib/bio/io/flatfile/index.rb 1056 def initialize(dbname, nsclass, arg) 1057 @dbname = dbname 1058 @nsclass = nsclass 1059 if arg.is_a?(String) then 1060 a = arg.split("\t") 1061 else 1062 a = arg 1063 end 1064 a.each do |x| 1065 self[x] = @nsclass.new(@dbname, x) 1066 end 1067 self 1068 end
Public Instance Methods
Source
# File lib/bio/io/flatfile/index.rb 1086 def close_all 1087 values.each { |x| x.file.close } 1088 end
Also aliased as: close
Source
# File lib/bio/io/flatfile/index.rb 1076 def each_files 1077 self.values.each do |x| 1078 yield x 1079 end 1080 end
Source
# File lib/bio/io/flatfile/index.rb 1070 def each_names 1071 self.names.each do |x| 1072 yield x 1073 end 1074 end
Source
# File lib/bio/io/flatfile/index.rb 1091 def search(key) 1092 r = [] 1093 values.each do |ns| 1094 r.concat ns.search(key) 1095 end 1096 r.sort! 1097 r.uniq! 1098 r 1099 end
Source
# File lib/bio/io/flatfile/index.rb 1101 def search_names(key, *names) 1102 r = [] 1103 names.each do |x| 1104 ns = self[x] 1105 raise "undefined namespace #{x.inspect}" unless ns 1106 r.concat ns.search(key) 1107 end 1108 r 1109 end