class Bio::PDB::Record::ATOM

    # File lib/bio/db/pdb/pdb.rb
975 def <=>(other)
976   return serial <=> other.serial
977 end

    # File lib/bio/db/pdb/pdb.rb
979 def do_parse
980   return self if @parsed or !@str
981   self.serial     = @str[6..10].to_i
982   self.name       = @str[12..15].strip
983   self.altLoc     = @str[16..16]
984   self.resName    = @str[17..19].strip
985   self.chainID    = @str[21..21]
986   self.resSeq     = @str[22..25].to_i
987   self.iCode      = @str[26..26].strip
988   self.x          = @str[30..37].to_f
989   self.y          = @str[38..45].to_f
990   self.z          = @str[46..53].to_f
991   self.occupancy  = @str[54..59].to_f
992   self.tempFactor = @str[60..65].to_f
993   self.segID      = @str[72..75].to_s.rstrip
994   self.element    = @str[76..77].to_s.lstrip
995   self.charge     = @str[78..79].to_s.strip
996   @parsed = true
997   self
998 end

    # File lib/bio/db/pdb/pdb.rb
970 def to_a
971   [ x, y, z ]
972 end

     # File lib/bio/db/pdb/pdb.rb
1047 def to_s
1048   atomname = justify_atomname
1049   sprintf("%-6s%5d %-4s%-1s%3s %-1s%4d%-1s   %8.3f%8.3f%8.3f%6.2f%6.2f      %-4s%2s%-2s\n",
1050           self.record_name,
1051           self.serial, 
1052           atomname,
1053           self.altLoc,
1054           self.resName,
1055           self.chainID,
1056           self.resSeq,
1057           self.iCode,
1058           self.x, self.y, self.z,
1059           self.occupancy,
1060           self.tempFactor,
1061           self.segID,
1062           self.element,
1063           self.charge)
1064 end

    # File lib/bio/db/pdb/pdb.rb
965 def xyz
966   Coordinate[ x, y, z ]
967 end