class Bio::RestrictionEnzyme::SortedNumArray

   # File lib/bio/util/restriction_enzyme/sorted_num_array.rb
22 def self.[](*args)
23   a = self.new
24   args.each do |elem|
25     a.push elem
26   end
27   a
28 end

   # File lib/bio/util/restriction_enzyme/sorted_num_array.rb
31 def initialize
32   @hash = {}
33   #clear_cache
34 end

    # File lib/bio/util/restriction_enzyme/sorted_num_array.rb
124 def +(other)
125   unless other.is_a?(self.class) then
126     raise TypeError, 'unsupported data type'
127   end
128   new_hash = @hash.merge(other.internal_data_hash)
129   result = self.class.new
130   result.internal_data_hash = new_hash
131   result
132 end

    # File lib/bio/util/restriction_enzyme/sorted_num_array.rb
168 def <<(elem)
169   push_element(elem)
170   self
171 end

    # File lib/bio/util/restriction_enzyme/sorted_num_array.rb
135 def ==(other)
136   if r = super(other) then
137     r
138   elsif other.is_a?(self.class) then
139     other.internal_data_hash == @hash
140   else
141     false
142   end
143 end

    # File lib/bio/util/restriction_enzyme/sorted_num_array.rb
103 def [](*arg)
104   #$stderr.puts "SortedNumArray#[]"
105   sorted_keys[*arg]
106 end

    # File lib/bio/util/restriction_enzyme/sorted_num_array.rb
109 def []=(*arg)
110   raise NotImplementedError, 'SortedNumArray#[]= is not implemented.'
111 end

    # File lib/bio/util/restriction_enzyme/sorted_num_array.rb
146 def concat(ary)
147   ary.each { |elem| push_element(elem) }
148   self
149 end

    # File lib/bio/util/restriction_enzyme/sorted_num_array.rb
195 def delete(elem)
196   #clear_cache
197   @hash.delete(elem) ? elem : nil
198 end

    # File lib/bio/util/restriction_enzyme/sorted_num_array.rb
114 def each(&block)
115   sorted_keys.each(&block)
116 end

    # File lib/bio/util/restriction_enzyme/sorted_num_array.rb
179 def first
180   sorted_keys.first
181 end

    # File lib/bio/util/restriction_enzyme/sorted_num_array.rb
174 def include?(elem)
175   @hash.has_key?(elem)
176 end

   # File lib/bio/util/restriction_enzyme/sorted_num_array.rb
37 def initialize_copy(other)
38   super(other)
39   @hash = @hash.dup
40 end

    # File lib/bio/util/restriction_enzyme/sorted_num_array.rb
184 def last
185   sorted_keys.last
186 end

    # File lib/bio/util/restriction_enzyme/sorted_num_array.rb
152 def push(*args)
153   args.each do |elem|
154     push_element(elem)
155   end
156   self
157 end

    # File lib/bio/util/restriction_enzyme/sorted_num_array.rb
119 def reverse_each(&block)
120   sorted_keys.reverse_each(&block)
121 end

    # File lib/bio/util/restriction_enzyme/sorted_num_array.rb
189 def size
190   @hash.size
191 end

    # File lib/bio/util/restriction_enzyme/sorted_num_array.rb
201 def sort!(&block)
202   # does nothing
203   self
204 end

    # File lib/bio/util/restriction_enzyme/sorted_num_array.rb
213 def to_a
214   #sorted_keys.dup
215   sorted_keys
216 end

    # File lib/bio/util/restriction_enzyme/sorted_num_array.rb
207 def uniq!
208   # does nothing
209   self
210 end

    # File lib/bio/util/restriction_enzyme/sorted_num_array.rb
160 def unshift(*arg)
161   arg.reverse_each do |elem|
162     unshift_element(elem)
163   end
164   self
165 end

   # File lib/bio/util/restriction_enzyme/sorted_num_array.rb
51 def internal_data_hash
52   @hash
53 end

   # File lib/bio/util/restriction_enzyme/sorted_num_array.rb
43 def internal_data_hash=(h)
44   #clear_cache
45   @hash = h
46   self
47 end